Large amplitude motions of odorants beyond the harmonic approximation: theoretical and experimental benchmarks on Cassis mercaptane
Résumé
Molecular recognition is doubtlessly one of the most important steps for scientists working in the field
of flavors and fragrances, since it represents the primary link between an odorant and the full
perception process [1]. At a molecular level, only some favored conformations of the odorant and
flavor molecules will induce an activation of the receptor protein. To understand the structural
preferences and molecular properties of such biologically active molecules, a joint approach using
highly accurate theoretical and experimental techniques is required.
On the experimental side, molecular beam Fourier transform microwave has emerged as an extremely
powerful tool to perform conformational analyses of isolated molecules in the gas phase [2]. This
method is especially interesting, when the systems of interest exhibit large amplitude motions that
cause difficulties for the prediction of theoretical geometries. On the theoretical side, previous
benchmark calculations showed that explicitly correlated coupled cluster technique with single, double
and perturbative treatment of triple excitations (CCSD(T)-F12) in conjunction with the aug-cc-pVTZ
or the cc-pVTZ-F12 basis sets lead to geometrical and spectroscopic (rotational, vibrational)
parameters and energetics of small molecules close to those obtained using the costly standard
CCSD(T) extrapolated to the complete basis set limit. In comparison, semi-empirical approaches are
usually inadequate to sample the conformational space of such medium-sized molecules, as the
energetically lowest conformations may easily be overlooked, which would subsequently strongly
complicate the assignment of the microwave spectrum. Consequently, explicitly correlated schemes
are viewed as the methods of choice for effective and accurate predictions for rigid, semi-rigid and
weakly bound small and medium-sized molecular systems, and for the mapping of their
multi-dimensional potential energy surfaces close and far from equilibrium getting access to full
consideration of anharmonic effects [3,4,5].
Here, we applied a scheme using a mixture of first-principle and explicitly correlated coupled cluster
methods to characterize the lowest energy conformations of the sulfur-containing odorant Cassis
mercaptane in their electronic ground states. The microwave spectrum was recorded in the frequency
range from 9000 to 14000 MHz and we successfully assigned the spectra of the three of the lowest
energy conformers, obtaining three sets of highly accurate rotational and centrifugal distortional
constants. This well-defined balance between state-of-the-art ab initio calculations and high-resolution
spectroscopy technique allows to assign the structures of the observed conformers under molecular
beam conditions and to push forward the development of new methodologies to improve
computational predictions at affordable computational costs.